Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------AVTSCGPVVTS--LYPCVSYIMNGGNTVP--------------------AAQCCNGIRNLNTMAQTTNDRRAVCTCIKNAVSQSGF------SYTNLNLNLAAGLPRKCGVNIPYQISPNTDCNSVH |
1PSY Chain:A ((1-125)) | AEFMESKGEREGSSSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--------RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGVRCMRQTRTN------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PSY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49346 for 631 contacts (-78.2/contact) +
2D Compatibility (PS) -8541 + (NN) -2153 + (LL) 628
1D Compatibility (HY) 0 + (ID) 900
Total energy: -60312.0 ( -95.58 by residue)
QMean score : 0.260
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