Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-EEKAACVVTDLKACLPDIIG-----ETPPSTKCCTKLKDK-------KSCFCEYLKNPLIAPYMT-SA------KQVLEACGVPVPVCQRF
4IX9 Chain:A ((3-94))
EKRTLIAVIADEDTTTGLLLAGIGQITPETQEKNFFVYQEGKTTKEEITDKFNHFTEERDDIAILLMNQHIAENIRARVDSFTNAFPAILEI
General information:
TITO was launched using:
RESULT:
Template:
4IX9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31062 for 412 contacts (-75.4/contact) +
2D Compatibility (PS) -7755 + (NN) -4728 + (LL) 0
1D Compatibility (HY) -800 + (ID) 250
Total energy: -44595.0 ( -108.24 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_4IX9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IX9-query.scw
PDB file :
Tito_Scwrl_4IX9.pdb
: