Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KKDLPFCNVELLPCVLPFKVRGHGSKLPNGCCEKMKK-----------STSCMCRFLMAKER-DLNA-AAHRIFWFCKISVPNCPKI
2ALG Chain:A ((10-79))
---------SLAPCI-PYVRGG--GAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIP-----
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24629 for 335 contacts (-73.5/contact) +
2D Compatibility (PS) -5837 + (NN) -3503 + (LL) 540
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -37379.0 ( -111.58 by residue)
QMean score : 0.179
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: