Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IPICNIETNDLVKCHPAFTGXNNPPPPGPDCCALVRAAN----------LQCLCPYKPYLSRF-GIDPSKVRPLLTRCGVNTPPSCF
2ALG Chain:A ((3-79))
--TCGQVSSSLAPCIPYVRGG---GAVPPACCNGIRNVNNLARTTPDRQAACNC-LKQLSASVPGVNPNNAAALPGKCGVSIP----
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27247 for 424 contacts (-64.3/contact) +
2D Compatibility (PS) -6716 + (NN) -3386 + (LL) -356
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -41505.0 ( -97.89 by residue)
QMean score : 0.000
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: