Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYESVDVNPFLMMDYYNQSRGCLIPDKMPHPFSSSIRHQHWSGSNHSIETQSTSSEEIVPSPPSPPPPPRIYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHREKNCIINKVTRNRCQYCRLQKCLEVGMSKESVRNDRNKKKKEEKKPECTENYTLSPDTEQMIDRVRKAHQETFPSLCQLGKYTTSNSSERRVALDVDLWDKFSELSTKCIIKTVEFAKQLPGFTTLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFANQLLPLEMDDAETGLLSAICLLCGDRQDLEQADKVDVLQEPLLEALKIYVRNRRPHKPHMFPKMLMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGLESSSGAQGSRASATTPGSCSPSLSPNSAQSSPPTQSP |
4DM6 Chain:A ((22-261)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------ESYEMTAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLE------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -131589 for 1890 contacts (-69.6/contact) +
2D Compatibility (PS) -25913 + (NN) -18472 + (LL) 7124
1D Compatibility (HY) -33600 + (ID) 10150
Total energy: -212600.0 ( -112.49 by residue)
QMean score : 0.464
|
|
|