Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMADNLYLYKGSVKITEMTLNLNEAKIIVYEDSGGNKYTLDASGISTLTNIDDIKLSDLLEGKVKFIYQKKDSNAIQIKGLGNIISTLLATQKAVDGESILAEEVSKKPVVDTILKATDLVNLNKNIVETELEDKFVKKDASNLTDAVNQKAFAEKILPAKDGQKSILVEKLGGLLGEPGAVYGDSNPKITAKDFLAEKASLVKTDGSNIVT------QTDKGKALVEAILNAK--EPISNKEVKIVET----ELAKTFVKTADLGTPAVA---------GKVLDAKDGQKSILVEKLGRFLDTTSTEYSN--QTAK---VFSGEKGTKPTAEEVVTKLLANNKKDLTDEVAQNPGLRAAVTSNSGLRGTVIDNLKGDTDFKTDITIQVDAKDPAFQGFVREIISQPSFEIPTSDDAPLSWDWI
4RJI Chain:A ((46-235))------------------------------------------------------------------------------------------------------------------------------------------------DALQDKG-PEIIVARHEQNAAFMAQAVGRLTGKPGVVLVTSGPGASN---LATGLLTANTEGDPVVALAGNVIRADRLKRTHQSLDNAALFQPITKYSVEVQDVKNIPEAVTNAFRIASAGQAGAAFVSFPQDVVNEVTNTKN-VRAVAAPKLGPAADDAISAAIAKIQTAKLPVVLVGMKGGRPEAIKAVRKLLKKVQLPFVETYQAAGTLSRDLEDQYFGRIGLFRNQPGDLLLEQADVVLTIGYDPIEYDPKFWNINGDRTIIHLDEIIADIDHAY


General information:
TITO was launched using:
RESULT:

Template: 4RJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 26342 for 986 contacts (26.7/contact) +
2D Compatibility (PS) -16315 + (NN) 5657 + (LL) 9996
1D Compatibility (HY) -2000 + (ID) 2450
Total energy: 21230.0 ( 21.53 by residue)
QMean score : 0.214

(partial model without unconserved sides chains):
PDB file : Tito_4RJI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RJI-query.scw
PDB file : Tito_Scwrl_4RJI.pdb: