Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEQKCLFVTIAGLPNAGKSTLINSITGKKIAIVTPKVQTTRTQIRGIAIYNETQIIFTDSPGIFSAETKLEKALVKSAWSAIKGDDVILLLIDASSYLKNIERIKTIFTRLRHTKTKCIFVINKIDLVKKPELKMTYKHLDLLYKLKKIFTISALKSDGLSDLMDYLSEVAPVSPWFYGEDQV-TDSSTSFLSAEITREKLFLNLREELPYSTAVITEQFEEKKDESLVIKQVIFVLKDSHKKIVLGKGGSNIKKIGIEARIELEKLFERKVHLFLFVKVRP-WTDRPEEYIDDV |
| 1WF3 Chain:A ((9-289)) | -------FVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDAAKYPEEAMKAYH-ELLPEAEPRM-LSALDERQVAELKADLLALMPEGPFFYPEDYAKSDQTFGEWVAEILREEAMKRLWHEVPYAVATKVEEVAERENGVLYIKAILYVERPSQKAIVIGEGGRKIKEIGQATRKQLEALLGKKVYLDLEVKVYPDWRKDPEALRELG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128031 for 2240 contacts (-57.2/contact) +
2D Compatibility (PS) -30226 + (NN) -9265 + (LL) 1020
1D Compatibility (HY) -13600 + (ID) 4900
Total energy: -185002.0 ( -82.59 by residue)
QMean score : 0.414
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