Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKKYDETKVKPAISTSQEPKRINGSKFQSVLSKRRYDINFDDKKYAVKTVKTRFLET--EQQSSKLRDLLESIPVIGRFLAKIFTSEKETYKKLQLQIDRSSKIRNESRIDDKYTEEISSKLKKSNIEQVDDKKSRSP |
3KKI Chain:A ((340-384)) | -------------------------------------------------------LETGDERNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYGDFYFR-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4303 for 223 contacts (19.3/contact) +
2D Compatibility (PS) -4494 + (NN) -605 + (LL) 4024
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -422.0 ( -1.89 by residue)
QMean score : 0.336
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