Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNKIGFLAVFALVISSQIGSGIFMLPISLAPYSTYSLISWAISGFGAVSLALVFATLCAKFPETGGPHVYVKHAFGP---TAAFFVGWTYWVISWVSTTALIVVG-VGYLTPFLHEEIKNIHLFL-ELLLFTIITLINLRGVATAGRVEFLLTVIKIAVLLAIPVMALFFFN-----RNNFIISKEMSSLTISQILARSTLLTLWCFVGVELATAPAGSVNNPAKTIPRAVVLGTICVAIIYF------INNFAIMGLING--NDLANSRAPYVDAIKIMFSGNW-HLIISIVAFVFCVGSLNAWVLSSGQVAFGLAKDRLMPQLFAKRNEHGSPFWGITTSSSGTAILLILTSNNNFAQQITSIIDFSVVSFLFVYLACSLAFLKVVIKERNYHKLLTGSIATTFCCWVILETSINTLLIASLFTTSGIPLYLFWYRRASAQ
3GIA Chain:A ((44-315))---------------------------------------TFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNIITGALSI--LLW-MSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLIL------GLFIFAGLITIHPSYVI-PDLAPSAVSGMIFASAIFFL-SYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFL--------GNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKRTFSN


General information:
TITO was launched using:
RESULT:

Template: 3GIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -173490 for 1783 contacts (-97.3/contact) +
2D Compatibility (PS) -25958 + (NN) -8865 + (LL) 5020
1D Compatibility (HY) -31600 + (ID) 3800
Total energy: -238693.0 ( -133.87 by residue)
QMean score : 0.200

(partial model without unconserved sides chains):
PDB file : Tito_3GIA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GIA-query.scw
PDB file : Tito_Scwrl_3GIA.pdb: