Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKYTQLFISVIALVISLFAGYKVVKHQPQSVLNIKVAIIDSDKVINESLALHNIQQQIKEQNSKLQQEFENELDKLKPSKEELELLSEEAKKERAEQFNKLALNARDNYTKKMSY---LEESYRDAVDSVFNKIKEVAKKTAEKNNIDLVLFISKKNQVLYSMNEIDLSDVVLKNINKEIPEFTLKGVN |
3IL9 Chain:A ((214-291)) | ----------------------------------KVAVTELAHIVDETLAANNLDR--------------SQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IL9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 33431 for 429 contacts (77.9/contact) +
2D Compatibility (PS) -7785 + (NN) -2085 + (LL) 8144
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: 26905.0 ( 62.72 by residue)
QMean score : 0.192
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