Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQYTFRIDNKDPLYKKLIKLPTAYYRLKHDGNKHNIHSNNNVILEIGNNTNGVKLRWENDKIVLHKGSSALY
3WX4 Chain:A ((9-25))
-VQYTFKIDILEKLYKFLPNLYHSIVNELVEELHLENNDFLIGTYKDLSKAGYFYVIPAPGKNIDDVLKTIMI
General information:
TITO was launched using:
RESULT:
Template:
3WX4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 548 for 50 contacts (11.0/contact) +
2D Compatibility (PS) -1642 + (NN) 1234 + (LL) 208
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -2552.0 ( -51.04 by residue)
QMean score : 0.117
(partial model without unconserved sides chains):
PDB file :
Tito_3WX4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WX4-query.scw
PDB file :
Tito_Scwrl_3WX4.pdb
: