Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIKVQRKKMELGAEVADQFLSEMNQTKIKIQDAKEATETARNVSKSFAQNAKDKNTELHDKVVNFTKKAETASENAEDFAREAFLSKQSTKTLKQETKEL
1Y66 Chain:A ((32-52))
-------QKLGLNQQAIEQFFREFEQRK-------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Y66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1224 for 74 contacts (16.5/contact) +
2D Compatibility (PS) -2368 + (NN) -2001 + (LL) 6516
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 1421.0 ( 19.20 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_1Y66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y66-query.scw
PDB file :
Tito_Scwrl_1Y66.pdb
: