Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLKAWLITTFLLLYPSATFCDDCNFNLPYRGLSCNLDLSHKNLSNIKKLLNNSDKFVALTFDDGPSSNRVNNIINILENYKAKATFFLLGERINKKTSEIVKKIYNAGHELGNHSWSHKKLTSLSSEKQLQELEKTNMVIKNAIERDVKWFRSPYGCHDDNLIKNTNQLNMCSILWTVDSLDWQGDKPEILVDRVVGNVHNGAIILFHDHDNKSNTVEALPQIIKILKKLGYEFVTLSEWEERVCKAKGVSMGEGVFKKILCG |
| 2Y8U Chain:A ((35-168)) | ---------------------------------------------------------IALTFDDGPS-EYTPQLLDLLSRYSARATFFVLGDAAAQNPG-LLQRMRDEGHQVGAHTYDHVSLPSLGYDGIASQMTRLEEVIRPALGVAPAYMRPPYLETNELVLQVMRDLDYRVISASVDTKDYENQDADAIINTSFQLFLDQLDAGGNIVLAHDIHYWTVASLAERMLQEVNARGLIATTVGDCLGDGEIAWYH--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24366 for 979 contacts (-24.9/contact) +
2D Compatibility (PS) -13813 + (NN) -3278 + (LL) 3432
1D Compatibility (HY) -9200 + (ID) 1850
Total energy: -49075.0 ( -50.13 by residue)
QMean score : 0.365
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