Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVIAENRKARFEYFILEEFEAGMVLLSSEVKSLRERKVNISDAYVTEKNGEIWLHNMHIAEYKAANKKKHKPKRERKLLLHKKEINKLISQIKTAGVTIVPLSIYFNDKGLVKTRIAIVKGKKLYDKRATIKQREWNRAKSRLSKNNL
2CZJ Chain:A ((2-123))
-APVLENRRARHDYEILETYEAGIALKGTEVKSLRAGKVDFTGSFARFEDGELYLENLYIAPYEKGSYANVDPRRKRKLLLHKHELRRLLGKVEQKGLTLVPLKIYFNERGYAKVLLGLARGK--------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CZJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54174 for 863 contacts (-62.8/contact) +
2D Compatibility (PS) -12738 + (NN) 796 + (LL) 2100
1D Compatibility (HY) -10800 + (ID) 2600
Total energy: -77416.0 ( -89.71 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_2CZJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CZJ-query.scw
PDB file :
Tito_Scwrl_2CZJ.pdb
: