Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQPEKTESTGLVLNIESPILIILCILSVAYFIYSEYSVEFTKKISKNDPFSRALKNRNKLFKRFFMIR
4TN7 Chain:A ((142-180))
LKESQTESTNAILEMQYPKVQKYCLMSVRG-CYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLEL
General information:
TITO was launched using:
RESULT:
Template:
4TN7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3151 for 139 contacts (22.7/contact) +
2D Compatibility (PS) -4028 + (NN) -1145 + (LL) 132
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -6490.0 ( -46.69 by residue)
QMean score : -0.024
(partial model without unconserved sides chains):
PDB file :
Tito_4TN7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TN7-query.scw
PDB file :
Tito_Scwrl_4TN7.pdb
: