Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSSNDETKKKHEIDDLPKFFKEKSKEIGKAFSNKVVEISIIRSISVTS-DEQEFSFKLRLLTIVDKDTHSIWILR
3V0R Chain:A ((12-39))
--------------------------------GDYVWKISEFYGRKPEGTYYNSLGFNIKATNGGTLDFTCSAQAD
General information:
TITO was launched using:
RESULT:
Template:
3V0R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1004 for 100 contacts (-10.0/contact) +
2D Compatibility (PS) -2963 + (NN) -859 + (LL) 1696
1D Compatibility (HY) -1600 + (ID) 200
Total energy: -4930.0 ( -49.30 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_3V0R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V0R-query.scw
PDB file :
Tito_Scwrl_3V0R.pdb
: