Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSNNIIESFGRDQLENFINYKNKIGIGALDIALNSGNKKAIEVLKSYGADIENR-VDGESRLLRALKEGNIEKMELLLS
4HQD Chain:A ((63-124))
------------------VNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLIS
General information:
TITO was launched using:
RESULT:
Template:
4HQD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1031 for 443 contacts (2.3/contact) +
2D Compatibility (PS) -7094 + (NN) -5511 + (LL) 912
1D Compatibility (HY) -1200 + (ID) 1150
Total energy: -13012.0 ( -29.37 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_4HQD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HQD-query.scw
PDB file :
Tito_Scwrl_4HQD.pdb
: