Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKRSIVFDALLILCISFFPIHANESCSNDGQFVENLMLADESTCHKSRKYNGREVISVKDKKLDFYVSANSGKIYSDNSETFVNGIKAIGERVPTLVESRYGTIIKNMVADEIESVKKFDDEIDFQWLNSISLGYYAGENGRIDFETMYS-KVNIKNGNSFPIFDRSAGIFAFLLNFYYNPSI-QDTQIAPYVGLGIGPTVFRLRKINGS---PQNSMPLNVPWFAYQVKLGVSYSIIPEIKTFLGYRYFSIPIP-----------IADDISTHNIEIGLIFNF |
| 2F1V Chain:A ((2-191)) | -------------------------------------------------------------EAGEFFMRAGSATVRPTEG----------------------------------------GFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRA--TGDIATVHHLPPTLMAQWYFGDAS-SKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22147 for 1249 contacts (-17.7/contact) +
2D Compatibility (PS) -17570 + (NN) -3310 + (LL) 7660
1D Compatibility (HY) -2400 + (ID) 1250
Total energy: -39017.0 ( -31.24 by residue)
QMean score : 0.219
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