Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILAIDTVGTGGSSIAIIDHDGNCFVEHNSISNSHAESFFQILNTLFNKHNYNYSKLDHLAVVVGPGSFNGIRVGISAAKGINLVTNKPLYGVNALEVQAYAMSLLCANNKKNIRAMIKSSQGFYMQLFDCNLLPLSDPTTTHDAQCLGTRTSGNNYITYMDCNLPKLDASHAGLLVHYRLKNKQKLNEVEALYLNELQYMKLL
3R6M Chain:A ((4-102))
--ILAIDT-ATENCSVALLVND-QVISRSEVAPRDHTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQASYRLHGATDVAVAIDARMSEVYWARYSRQENGEWIGVDEECVIPPARLAEEAQADSKTWTTAGTGWSAYQEELAGLPFNTADSEVLYPDSQDIVILAKQELE
General information:
TITO was launched using:
RESULT:
Template:
3R6M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64216 for 732 contacts (-87.7/contact) +
2D Compatibility (PS) -10678 + (NN) -4214 + (LL) 200
1D Compatibility (HY) -8800 + (ID) 1600
Total energy: -89308.0 ( -122.01 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_3R6M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R6M-query.scw
PDB file :
Tito_Scwrl_3R6M.pdb
: