Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELNKIAASILLSGLIIMIVSNVVDMLYNPEKYKIEHQTMVATGSNEPQKKIEQVALDIGALMQSASLEKGKSI-AKKCIACHSFDKGGANKVGPNLWNIVGNKKAHLGDSFNYSKAMLEKGGKWGYEELFAFLKSPKDYIKGTRMAFAGISNPQEIADLVSYLRQLSDNQVALPK
2PCB Chain:B ((1-103))-----------------------------------------------------------------GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQ-APGFTYTDANKNKGITWKEETLMEYLENPKKYIPGTKMIFAGIKKKTEREDLIAYLKKATNE------


General information:
TITO was launched using:
RESULT:

Template: 2PCB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17286 for 721 contacts (-24.0/contact) +
2D Compatibility (PS) -11048 + (NN) -5452 + (LL) 6416
1D Compatibility (HY) -6400 + (ID) 2200
Total energy: -35970.0 ( -49.89 by residue)
QMean score : 0.411

(partial model without unconserved sides chains):
PDB file : Tito_2PCB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PCB-query.scw
PDB file : Tito_Scwrl_2PCB.pdb: