Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSVIEITSIKRRFCAYLIDMAVLLIPNLLIIILLKNFPLILDLLYMCVNCSYFTYFISSAAQATPGQQLMNIHTISLDGSKINLSLAFDRSISQFFLHLLNNVIAILIELFQEQNELVSALIILGVIMLLLTICWYLVACFSQEKQTYHDMLFDTIVVKGAIK |
1SMZ Chain:A ((18-26)) | ------------------------------------------------------------------------------------------------------------------------------------------------ALAALAKKIL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2099 for 28 contacts (75.0/contact) +
2D Compatibility (PS) -853 + (NN) 302 + (LL) 15536
1D Compatibility (HY) -400 + (ID) 0
Total energy: 16684.0 ( 595.86 by residue)
QMean score : 0.310
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