Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFFQKLTGKFCNFFTFKGLFASDIAIDLGTANTLVYQKNQGIVLDEPSVVARIKEKGSYIPYAFGKKAKMMLGKTPGEIEAIRPLKDGVIADFKSAEEMLKYFIRSANTKLTVNKPNIIICVPSGSTPVERRAIQDAAESAGANEVFLIEEPMAAAIGAGLPVTEPEGSMVVDIGGGTTEVAIISLGGIVYSRSA-----RVGGDIMDEAIRSYI----RENHKLLIG---------ETTAEKIKKSLGSA-----SLP----DENNKEWMMVKGRDLVSGMPKEMLLSEYQVAESLIEPVHQIISAIKTALESTPPELSSDIVDKGIVLSGGGGLLRNLGKVISETTKLPVHVADDPLCCVALGSGKVLENMDYFSHVLFKQD |
| 2V7Y Chain:A ((85-344)) | ---------------------------------------------------------------------------TPQEISAI----------------ILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHL-------------EMTLTRAKFEELSAHLVERTMGPVRQALQDAG--LTPADIDK-VILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGEVKDVVLLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V7Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99803 for 1674 contacts (-59.6/contact) +
2D Compatibility (PS) -25583 + (NN) -10515 + (LL) 6464
1D Compatibility (HY) -9600 + (ID) 3850
Total energy: -142887.0 ( -85.36 by residue)
QMean score : 0.527
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