Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSQKGVDLAKSKKDISKFETASSNQKKEWETDSKKKAEEIERLKTLKKKSDEELQEARGKLAEQERLLKYPEAEKSKRCCSIIYCSTYRGTS
4XA3 Chain:A ((51-92))
-------------KSLSKANSEVAQWRTKYETDAIQRTEELEE---AKKKLAQRLQEAEEAVEAVNAKCSSLEKTKHRLQNEIDFYFGKLRNI
General information:
TITO was launched using:
RESULT:
Template:
4XA3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 14094 for 165 contacts (85.4/contact) +
2D Compatibility (PS) -4533 + (NN) -1071 + (LL) 992
1D Compatibility (HY) -800 + (ID) 800
Total energy: 7882.0 ( 47.77 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_4XA3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XA3-query.scw
PDB file :
Tito_Scwrl_4XA3.pdb
: