Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKVGVIGCSGRMGKRILNELITNTQVEIAGAVARLGSKYIGSDIGSAVYHSSNLGIKVTSSISDVFESSDVVIDFTTKECMLACLKAAMKFKTPLVSGTTGIESINLKKYAAKIPI---LWSANMSVGVNVLLKLVKKAAEFLDNEYDVEIWEMHHNLKKDSPSGTAMEFGKAIANALKVDFQP---YQHSHNSSNIREKGKIGFAVSRGGGVVGDHSVMFINSDERIELNHKAIDRTTFARGAVRAAIWLYENKRETPGLYSMQDVI
1DRW Chain:A ((6-268))
--IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGE-LAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGE-RVPGTIGFATVRAGDIVGEHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKE---SGLFDMRDVL
General information:
TITO was launched using:
RESULT:
Template:
1DRW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -170325 for 2062 contacts (-82.6/contact) +
2D Compatibility (PS) -27785 + (NN) -11280 + (LL) 876
1D Compatibility (HY) -16000 + (ID) 5250
Total energy: -229764.0 ( -111.43 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_1DRW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DRW-query.scw
PDB file :
Tito_Scwrl_1DRW.pdb
: