Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRSNIRQLFYYIKPNLHYFIIAFIAV-LSSALTIL---LFGRGLSNIIDSGAEHNFTTKLLVTIFIVLAI-SLTAFIRLYFIGIGSEKVIARIRYDLYGNITDLQPSFFENTSVQDVISALITDTSVLQSIMNSSLLTILRNFIILIGSVAMLLYTNLHLTTYAAAIIPMLLIIMTSLGKKVRNYARFAQNKLSELASFSEENFRSIVTIKSFVLEENEKIRFKEHLDSVSKSYVKLVFLRAILVTLVIACVIGSLVILLFFGIKEVLSNNITVGELSSFVFYSALAAGTVNNLSDNISDLQRGFGIVERLFEFKNMKSSIMDVDNPIKICGVKKGISFNGVTFFYESQPDKPALDNVSFSIETGQAVSIIGPSGSGKSTILKLLLRFHDPGKGSITIDGYNVKSIALSNLRSLFGLVPQDHIIFSCSIMENILYGKPGAEYEEVRQAAISAYAMEFIEKLPDKFDTFVGKRGLKLSEGQKQRIIIARAILKNPQILILDEATSALDYKSENLVQKALSKLMQNRTTIMITHRLSTALKTDKVIVVNHGKVEEVGTHDSLMSKGGLYAKLTKI |
| 4Q4J Chain:B ((23-586)) | --ATLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTI-DVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDDPD-AVELREVRGEIEFKNVWFSYDKK--KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILILDEATCNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYELFTS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -347248 for 4091 contacts (-84.9/contact) +
2D Compatibility (PS) -59352 + (NN) -25264 + (LL) -16
1D Compatibility (HY) -48000 + (ID) 9250
Total energy: -489130.0 ( -119.56 by residue)
QMean score : 0.408
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