Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDKMYEECGVFGISCNKDSAFDSILGLHALQHRGQESFGV-VTSNNDKLHSYHFQGQVSSVLDNIDEIKKSLPGNYAIGHVRYSTSGNKSGVQPILGKSNKFGDFAIAHNGNLINISPIREQLIKQGRVFQSDIDTEVVARLVEANTKN--SFLGSFIYALKQIQGAYSFVAINR---EVVVGVRDSAGIRPLVLGKLNSSYVLASETCALDIVNAEFIREIEPGELVTIDQNGNLASAFPLSQQKSSFCIFEYIYFSRPDSIIEDRSIYDIRKEIGRTLAEESPPKNNVDMVVPIPDSGIPAAIGYTKYSGLPIELGIIRNHYIGRTFIQPTAEVRKVRIKLKFNANKDILKGKNIILIDDSIVRGSTLKSIIVMLKDAGVKEIHLKISSPPIKYSCFYGIDTPECKDLIAASKSVREIEAIIGVNSLTFLSIDGLYQAVNGEKRNNTAPQYCDACFTGDYPIGK |
| 2J6H Chain:A ((1-216)) | --------CGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEE--HPLHGGTGIAHTRWATHGEPSEVN---AHPHVSEHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTLLAARSGS---PLVIGLGMGENFIASDQLALLPVTRRFIF-LEEGDIAEITRRSVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150734 for 1938 contacts (-77.8/contact) +
2D Compatibility (PS) -23242 + (NN) -11921 + (LL) 1624
1D Compatibility (HY) -9600 + (ID) 3250
Total energy: -197123.0 ( -101.71 by residue)
QMean score : 0.552
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