Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNINIFVFLALSFVTSFNSIQAQILYTWSQVIPDNKLSVRAIIDSNTCPVAYVDGKGVEMLNRSSINNGDHTETICEMIVETGAQNISIDGIQVPILPEKISRIAFIGDTGCRINALFQQECNSVDSWPFKKNLDSIALHEPDLIVHVGDYHYRKTKCRNAQKCGNIYGYNKEAWYADWFEPAKDI-LLQSSFLFVRGNHENCDRA--YEGWFRYLDSHPFSSEKCENFVPGWFLDI------GPMKFFIFDSSSGEDIF--------TTQSTIDAFEKQFDKLT--QDS-SDKPTWFLTHRPLWRSPKKEFLTLKSHGNLTQIEAFGDKFPNNVATIVSGHIHIAQILLMNNVPDQIIVGNGGALLHAQDQ-EPVYQNIEFSYSNGKNYLAHEIKNFFGFGFSILNLDNH--EFTFYDQNNEEMYSAKLTEDFKLEIN |
| 1UTE Chain:A ((4-304)) | --------------------------------------------------------------------------------------------------TPILRFVAVGDWGGVPNAPFHT-A--REMANAKAIATTVKTLGADFILSLGDNFYFTGVHD----------AKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKR-WN------FPSPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAAAKEDYVLVAGHYPVWSIAEHGPT---HCLVKQLLPLLT---THKVTAYLCGHDHNLQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPN-------GY--LRFHFGAENSLGGFAYVEITPKEMSVTYIEASGKSLFKTKLPRRA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UTE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98343 for 2481 contacts (-39.6/contact) +
2D Compatibility (PS) -29319 + (NN) -9073 + (LL) 8640
1D Compatibility (HY) -4000 + (ID) 2150
Total energy: -134245.0 ( -54.11 by residue)
QMean score : 0.312
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