Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TVDIADIRSKSSQELYEILVNLRKEFVNL-IFQKKLGQCNNISRFSLIRKSIARILTVLNERRIEGKSA
3G6E Chain:V ((5-62))
---VQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGD-----
General information:
TITO was launched using:
RESULT:
Template:
3G6E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20064 for 295 contacts (-68.0/contact) +
2D Compatibility (PS) -6138 + (NN) -3745 + (LL) 504
1D Compatibility (HY) 0 + (ID) 950
Total energy: -30393.0 ( -103.03 by residue)
QMean score : 0.792
(partial model without unconserved sides chains):
PDB file :
Tito_3G6E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G6E-query.scw
PDB file :
Tito_Scwrl_3G6E.pdb
: