Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARRNKARKRKISPDSRYDSVLLMRFINVIMKYGKKSVAEKIVYNALSSAEKEVNERGVSIFETAVENVTPSVEVRSRRIGGATYQVPVEVKKDRAVSLALRWIVKSASAMRKKSGKGFFKCLCSEILDAYNKRGGAFKMCEEKYKMAEANKAFSHLRF
1HR0 Chain:G ((2-156))
-ARRRRAEVRQLQPDLVYGDVLVTAFINKIMRDGKKNLAARIFYDACKIIQEKTGQEPLKVFKQAVENVKPRMEVRSRRVGGANYQVPMEVSPRRQQSLALRWLVQAAN---QRPERRAAVRIAHELMDAAEGKGGAVKKKEDVERMAEANRAYAHYRW
General information:
TITO was launched using:
RESULT:
Template:
1HR0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79078 for 1134 contacts (-69.7/contact) +
2D Compatibility (PS) -16636 + (NN) -6950 + (LL) 660
1D Compatibility (HY) -10400 + (ID) 3450
Total energy: -115854.0 ( -102.16 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_1HR0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HR0-query.scw
PDB file :
Tito_Scwrl_1HR0.pdb
: