Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPN-GFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCTEETERSAGGFGSSGR
2HR6 Chain:A ((4-137))
-------KIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLNDAVELAPGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVWNRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDF--D--------------
General information:
TITO was launched using:
RESULT:
Template:
2HR6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81415 for 886 contacts (-91.9/contact) +
2D Compatibility (PS) -14158 + (NN) -1123 + (LL) 552
1D Compatibility (HY) -8800 + (ID) 2650
Total energy: -107594.0 ( -121.44 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_2HR6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HR6-query.scw
PDB file :
Tito_Scwrl_2HR6.pdb
: