Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGSIFIFLGICLVTISTIGVIRFTDFYTRLHAAGITDSSGAMLLLIGLALQNEFSVNTVKIVLLIFIIWVANSTNSYILARTHYKSKEKAIKES
2OP5 Chain:A ((36-47))
-----------------------SEDLYSRLSAAGLIRHVISKVWNKEQHRISMVFEYDSKEGYQKCQEIIDKEFGITLKEKLKKFVFKIHNNRG
General information:
TITO was launched using:
RESULT:
Template:
2OP5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1601 for 40 contacts (-40.0/contact) +
2D Compatibility (PS) -1178 + (NN) 412 + (LL) 2324
1D Compatibility (HY) -800 + (ID) 350
Total energy: -1193.0 ( -29.83 by residue)
QMean score : -0.073
(partial model without unconserved sides chains):
PDB file :
Tito_2OP5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OP5-query.scw
PDB file :
Tito_Scwrl_2OP5.pdb
: