Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEIDYHKITIVMTNGQEFETRSTYGKEGDKIKLDRDPLTHPAWTGSLTSGSTNKTSKIAKFNDKYGNIF
2D2C Chain:C ((172-193))
-----------------------------------------------FTASATGTITKIAKEEDEYGNVK
General information:
TITO was launched using:
RESULT:
Template:
2D2C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 387 for 53 contacts (7.3/contact) +
2D Compatibility (PS) -2221 + (NN) -906 + (LL) 2520
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -1920.0 ( -36.23 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_2D2C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D2C-query.scw
PDB file :
Tito_Scwrl_2D2C.pdb
: