Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIIYDYERGIENNVALTFGNFDGIHLGHELAISTLKKIAQERGFPSAILTFEPHPSTILFNRNNFRLINQEQKKELISSYGIDYLYIINFNKGFSQISCDDFISKILIDRY--NTKHIIVGESCTFGHKRLGNTLILRKHSETYGYSLTKLEPLTVNGKICSSSSIREHIQKGEIEIANKLLGRSYQVSGTVMKGALRGREIGFPTINIPI-EDCMIKPKFGTYYAKVAFTSLDVIPARDAGIYRSQYQSNETTEGSAKGSFSGSGPSWLYGVVNIGMRPTFNDLKKPIVEMHIFDFNEDIYDRKVNIQLLKFIRSEKRFLSVDELTKQINHDILEAYQLRTDL |
1T6Z Chain:A ((2-284)) | ---------------VVSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIYTISYPPEYFLPDFPGL-LMTVESRVEMLSRYA--RTVVLDF------FRIKDLTPEGFVERYLSGVSAVVVGRDFRFGKNASGNASFLRKK----GVEVYEIEDVVVQGKRVSSSLIRNLVQEGRVEEIPAYLGRYFEIEGIV-----------FPTANIDRGNEKLVDLKRGVYLVRVHL-----------------------PDGKKK-----------FGVMNVGFR------RNVKYEVYILDFEGDLYGQRLKLEVLKFMRDEKK----EELKAAIDQDVKSARNMIDDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T6Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177083 for 2023 contacts (-87.5/contact) +
2D Compatibility (PS) -27982 + (NN) -5289 + (LL) 3728
1D Compatibility (HY) -25200 + (ID) 4350
Total energy: -236176.0 ( -116.75 by residue)
QMean score : 0.518
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