Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTSAIFFSEGSYIVIMNNIIVKKFGGTSLTD---LTRVANLIKKDVDKGYRIIVV----------VSAIAGLTDQMVFQARQTLN-----------------------------LSHKQALSE----YDVMLSAGEQISCGLLAITLLSIGVNAKSWLAWQLPIITDNSYSESK-----IKTIKIDHLKRSFAEGYTVAIIAGFQGIYDD-RITTFGRGGSDISAVALAVAFGVRVCEIFTDIDGIYTADPKIVPKARKLKSISYDEMLEMSSSGAKILHNRSVQLAMKHNIKVQVLSTFKEVEGTAVLHENDVLERHTITGITYSTNEALITF--TNFANTLRTLKDMAG----ANIKIDMIHGSSIVIS--------------EFDIDLMKEL--LNKNEDYVINNNAAKISIIG------IGVMSVMYHTLKFFSEKKIEILAITASEIKISIIVQRECAEALVRDLHTELMCTEGG |
| 2J0X Chain:A ((3-448)) | ------------------EIVVSKFGGTSVADFDAMNRSADIVLSDAN--VRLVVLSASAGITNLLVALAEGLEPGERFEKLDAIRNIQFAILERLRYPNVIREEIERLLENITVLAEAAALATSPALTDELVSHGELMSTLLFVEILRERDVQAQ-WFDVRKVMRTNDRFGRAEPDIAALAELAALQLLPRLNEG--LVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFVGSS-KDPRAGGTLVCNKTENPPLFRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLITTSEVSVALTLDTTGSTSTGDTLLTQSLLMELSALCRVE---VEEGLALVALIGNDLSKACGVGKEVFGVLEPFN---IRMICYGASSHNLCFLVPGEDAEQVVQKLHSNLFE---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J0X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261533 for 2884 contacts (-90.7/contact) +
2D Compatibility (PS) -39466 + (NN) -13773 + (LL) 2132
1D Compatibility (HY) -26800 + (ID) 5700
Total energy: -345140.0 ( -119.67 by residue)
QMean score : 0.439
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