Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAIAIIDFGSQFTQLIARQIREMDVYCEIFPSNISFETISK--FNGFILSGGPQSVHDGCSEASGVAHEIIKFNEAT---NVPILGICYGQQLICHYFGAKVKKEFKQEFCKTKIKILKESSIVKDVWNVNSEVDVLMNHADSVETAPQGFTVIA-SGVINQTIAIVANEQRRIYCTQFHPEVKPTANGSKLLSNFL-DIANCKRDWTMKSIIEKQKEKIKNVVGEKKVIAAVSGGVDSSVAVALTYKAVGK-QLNCIFIDTGLLRKNQTIALLEE-----IPVNYVDKSNLFLS----------RLKGITDPEEKRKIIGNTFIEVFEE---EAKKIGNADFLMQGTIYSDVVESGH--ASGNASTIKSHHNVGGLPEKMNL--KLVEPLRYLFKDEVRLLGKEIGLSNEIIFQHPFPGPGLAVRVIGEVD-------EERVRILQEIDEIYINTMKNYDLYDKIWQAF------------------AVLLPIRTVGVMGDGRTYGYVCALRAVTSFDGMTADAFPFENKSQHSLIFWDFLQNVSSIIVNNVSGVNRVVYDLTSKPPATIEWE |
| 2VXO Chain:A ((31-566)) | --AVVILDAG--YGKVIDRRVRELFVQSEIFPLETPAFAIKEQGFRAIIISGGP----------------APWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHK-------VFNISVDNTCSLFR---GLQKEEVVLLTHGDSVDKVADGFKVVARSGNI---VAGIANESKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSKVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAAHSFYNGTTTLPRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVRILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSASVKKPHTLLQRVKACTTEEDQEKLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISSKDEPD-------------------WESLIFLARLIPRMCHNVNRVVYIFGPPVKEPPTDV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -297960 for 3475 contacts (-85.7/contact) +
2D Compatibility (PS) -48026 + (NN) -8800 + (LL) 3120
1D Compatibility (HY) -34400 + (ID) 9550
Total energy: -395616.0 ( -113.85 by residue)
QMean score : 0.437
|
|
|