Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIGSPVILAPMSGVTDYPFRSIVKKLGASL-LVSEMIASRAMIMQTRQSMQKAKVDELT-AVQLAGCEPDIMAEAAKLNEDMGAKIIDINFGCPVKKVVNGYAGSALMRNEKKAAEIIEAVVKAVNVPVTVKIRTGWNNEN--RNAPRLAKIAEDLGAKMITVHGRTRAQLYNGQA---------DWKFIRNVKEQV-KIPVIVNGDIKSLNDIQNALKESRADGVMIGRGAYGRPWLINQAINFLSGSEVSEPTASEKLSIILEHYDNILEYYGNDAGIKIARKHIGWYSSGFKNSSEFRVRVNNMTDSMEVKENIVSFFSQV |
| 3B0V Chain:C ((29-259)) | -------VAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNRERLLAFRPEEHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDW--VHRLKGDFPQLTFVTNGGIRSLEEALFHLK--RVDGVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVLKGTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEE----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3B0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -127506 for 1753 contacts (-72.7/contact) +
2D Compatibility (PS) -23340 + (NN) -7616 + (LL) 1144
1D Compatibility (HY) -13600 + (ID) 3750
Total energy: -174668.0 ( -99.64 by residue)
QMean score : 0.524
|
|
|