Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKRNNFNDSYVSVNNRTGFKRSKVCPLATSQDEDIDYKNTDLLSRFTSDYGRILPRRLTGVCAKKQRKLRLAIIRARFLALVPYCTKKV
2UXD Chain:R ((33-86))
-------------------------------------DYRNVEVLKRFLSETGKILPRRRTGLSAKEQRILAKTIKRARILGLLPFTEKLV
General information:
TITO was launched using:
RESULT:
Template:
2UXD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19015 for 311 contacts (-61.1/contact) +
2D Compatibility (PS) -5836 + (NN) -3161 + (LL) 1604
1D Compatibility (HY) -3600 + (ID) 1400
Total energy: -31408.0 ( -100.99 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_2UXD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UXD-query.scw
PDB file :
Tito_Scwrl_2UXD.pdb
: