Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKKTRIESDSLGEVKVPSEHYWGAQTQRSLENFKIGMEKMPEPIIKALAMVKLAAARVNVKHGTIDEKVGNAICVAAKEIIDGKFNNEFPLVVWQTGSGTQTNMNINEVISNRAIEILGSNLGSKFPVHPNDHVNYGQSSNDTFPTAMHIAAAKQINHSLIPNLEVLHKALNDKVQEFKNIIKVGRTHLQDATPLTLGQEFSGYAVQIKKGIERIKSTLSNLYELAQGGTAVGTGLNTKEGFAEDFAKEVAEITNLPFTSADNKFEALAANDALVELSGTLNTVAVSLMKIASDIRLLGSGPRCGIGEITLPENEPGSSIMPGKVNPTQCEAVTMVCAQVMGNHVAVTVSGSNGHFELNVFKPVIIYNVLQSIRLLADASLNFTEKCVIGIKANEKRIKDLLNQSLMLVTILNTHIGYDNAAKIAKLAYKENITLKEAAVKLKLLTEQEFERIVKPEKFINH |
1YFE Chain:A ((5-460)) | -----RSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSLIHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQSNMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQLIPQLKTLTQTLNEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQAHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSIMPGKVNPTQCEALTMLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIEPNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEFDSWVRPEQMV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201960 for 3906 contacts (-51.7/contact) +
2D Compatibility (PS) -49236 + (NN) -23882 + (LL) 276
1D Compatibility (HY) -40400 + (ID) 13400
Total energy: -328602.0 ( -84.13 by residue)
QMean score : 0.543
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