Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSQSPKRMYGTGNNFVIIDSRSINNL--NWNYREIANQN---GCDQIIVITNSSAADCFMH--IYNADGGEVEMCGNAARCVGYLIMSEKSTEYATIELVNKRILECFKV-GGRSIKVNMGKPLFKWHEIPLSA----KCDPLHLPIELEMLKDPVAVNIGNPHMVFFVDNISEIPLQSLGPKLEKHTLFPKKVNVNIAQVEKSGEISLRVWERGTGITASCGSAACAALIASVLRGYLITRQTSVNLPGGKLLIEW---PDNIFMTGDIGFL |
| 2Q9H Chain:A ((5-263)) | -------KMHGLGNDFVVVDGVTQNVFFTPETIRRLANRHCGIGFDQLLIVEAPYDPELDFHYRIFNADGSEVSQSGNGARCFARFVTLKGLTNKKDISVSTQKGNMVLTVKDDNQIRVNMGEPIWEPAKIPFTANKFEKNYILRTDIQTVLCG---AVSMGNPHCVVQVDDIQTANVEQLGPLLESHERFPERVNAGFMQIINKEHIKLRVYERGAGETQACGSGACAAVAVGIMQG-LLNNNVQVDLPGGSLMIEWNGVGHPLYMTGEATHI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187018 for 2031 contacts (-92.1/contact) +
2D Compatibility (PS) -26703 + (NN) -8644 + (LL) 236
1D Compatibility (HY) -20000 + (ID) 4650
Total energy: -246779.0 ( -121.51 by residue)
QMean score : 0.448
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