Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYVVIINIVLLKVLMVLTITILSGGFSRERKISLMSGKAVKKALDSLSYNAIEIDVNS--NTAEKLKKINPDLAFIALHGPYGEDGCIQGLLEILGIKYTHSGVMASAIAMNKAMSKHIFRSLGIDTPKGYIISRGDILKNN--IKIDYPYVLKPINEGSSIGVHITFSHEDYLK-LKNMFSVIPVHDAGIEEEEPVWITRDLMIIEEYIPGIELHTAVLLDEAAGTMEIRPKNKFYDYKAKYTNGFA-EHIFPAEIPDNIYEMTLEHALKVHRFLGCKTISRSDFRYNPKDNTLKMLEINTHPGFTELSLVPEIAKLTKGIDFNELVKIIIEDSLQHKKILEIK |
| 3R23 Chain:A ((6-303)) | ------------------IGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLIEKAKDI--DFALLALHGKYGEDGTVQGTLESLGIPYSGSNMLSSGICMDKNISKKILRYEGIETPDWIELTKMEDLNFDELDKLGFPLVVKPNSGGSSVGVKIVYDKDELISMLETVFE---------------WDSE--VVIEKYIKGEEITCSIFDGKQLPIISIRHAAEFFDYNAKYDDASTIEEVI--ELPAELKERVNKASLACYKALKCSVYARVDMMV--KDGIPYVMEVNTLPGMTQASLLPKSAD-AAGIHYSKLLDMIIETSLRVRKEEG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R23.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147161 for 2320 contacts (-63.4/contact) +
2D Compatibility (PS) -31612 + (NN) -10030 + (LL) 4100
1D Compatibility (HY) -27200 + (ID) 5400
Total energy: -217303.0 ( -93.67 by residue)
QMean score : 0.422
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