Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKESSKTKLSEDYTPSEDEEYMSVR--------QLEYFNLKLESILAELEKQELEDSAYYFDE-DSGNEKLIKRRKDR----KEKIKEALEKIKLGTYGYCDRTGEE------IGIARLKANPLA-VYCIEEQERLEKEKNVYKTDD
1JWH Chain:C ((26-137))
-----------------DEDYIQDKFNLTGLNEQVPHYRQALDMILDLEPDEELEDNPNQSDLIEQAAEMLYGLIHARYILTNRGIAQMLEKYQQGDFGYCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTPKSSRHHHTD
General information:
TITO was launched using:
RESULT:
Template:
1JWH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 14127 for 440 contacts (32.1/contact) +
2D Compatibility (PS) -9470 + (NN) -2637 + (LL) 756
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -4674.0 ( -10.62 by residue)
QMean score : 0.197
(partial model without unconserved sides chains):
PDB file :
Tito_1JWH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JWH-query.scw
PDB file :
Tito_Scwrl_1JWH.pdb
: