Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTISILGAGAWGTAIANSLSGK-QNVILWTHNKTTFESISRTRESDKLL-GCQIPENVSVKLAIKETVNA-SAMIFAVPTQSLRKVCQQLHDCNLKKDVAIILACKGIEKSTLKLPSEIVNEVLPNNPVAIFSGPSFAIEVAKKLPYSMVLACQDDTLGSKLISELQQENIKLHFSSDVVGVQICAALKNVFAIACGIVLGKKLGFNAHAALVTKSMNEVKTLYLAKTDSVSI---DIDTLLGPACLGDLIMTCTSLNSRNLSFGFKIGSSNNSFDAQQTLSEGKSVIEGFSTAQSAFNLAEKLKIKMPICEAVYRLLYESASIEDTISVFVG |
| 3K96 Chain:A ((32-337)) | --IAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPL-IDAKTRIAWGTKGLAKGS-RLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRL-------VSVFGGKQETLTGLAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQ---AIEGLYNTDQVHALAQKHAIEMPLTFQVHRILHEDLDPQQAVQELLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K96.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -264998 for 2686 contacts (-98.7/contact) +
2D Compatibility (PS) -31343 + (NN) -5480 + (LL) 644
1D Compatibility (HY) -24000 + (ID) 5350
Total energy: -330527.0 ( -123.06 by residue)
QMean score : 0.555
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