Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYDFKNVEKFYQDRWD----FSIGKNNEQGKCYVLEMFPYPSGKIHMGHLRNYVIGDVIARYKRACGFEVLHPIGWDAFGLPAENAARDNNVNPAAWTKENIDNMRAQLKSIGLSYNWERELSTCEADYYKHEQKFFLDFLKQGLVYRKKSWVNWDPIDQTVLANEQVVDGKGWRSGAIVEKRELSQWFLKITDFAEDLLECLQGLENWPEKVKMMQDRWIGKSEGVTIEFKIVGLNKKLKVFTTCPHTLFGASFCAVAIEHPIVQDLM--SKEIQDLISSIK-IQGKNNEKVGIYTGLNVKHPFLDKELPLYVANFVLMEYREGAIFGCPAHDQRDFEFAQEYDLPIIPVISSARLGIIPACDQGSYTGSQCQATRMADGLNEEYTNNSIMFNSEFLNGLTVSEARKVIVEKLEEKGIGKKTINYRLHDWGVSRQRYWGCPIPVIYCKNCGTVPVPEEDLPVTLPTDVDFTSGGNPLDKHPTWKFVNCPKCKEQAERETDTFDTFFESSWYFAAF-CSENKS--IDKNACNRFMPVDYYIGGIEHAILHLLYSRFFCRALTKCGYFNVKEPFSTLITQGMVC--HVTYKDKNGK--WLFP-------EEAKRLI----TQGAKIQVGKVEKMSKSKKNTVDPNFIIEKYGADTARLFVLSDTPPEKDMEWSNDGVEGCSRYINKLWRMVMQFKP---VVILNQSPVKQVADTEIQKEDMLSHAGMIPDKNVTGKFLGYRKKIHKLLHGLTDDL-ENCRLNCVVAKFREMTNLIAE--IDVKTGKSLINEGICILIRVVEPFIPHLAESLWREIGGEGMLYLQPWPKAAKSLLIDDVVTVAVQINGKLRATIEVAINLHQEELKQIAINS--VSNRVDQSKVRAVYAVSNKIVNIVT |
| 3ZJV Chain:A ((24-878)) | -QYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAV------------------------------EIPQWFIKITAYADELLNDLDKLDHWPDTVKTMQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNPELAAFIDECRN----TMEKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLNIKPVILAA-------------DGSEPDLSQQA------LTEKGVLFNSGEFNGLDHEAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQLPVILPEDVVMDGITSPIKADPEWAKTTVNGMP--ALRETDTFDTFMESSWYYARYTCPQYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTAKGDVAALNVD-----ALTENQK--------------------ALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAPTDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVEDSTLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKY--------VIYVPGKLLNLVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -501419 for 6291 contacts (-79.7/contact) +
2D Compatibility (PS) -82712 + (NN) -20541 + (LL) 5080
1D Compatibility (HY) -70000 + (ID) 17350
Total energy: -686942.0 ( -109.19 by residue)
QMean score : 0.506
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