Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSPIISISNLHLSFNDKIILNDISLDILKGESLVILGSSGSGKSVLTKTIIGLLAPDSGSIKINSKS----------KNKFGVLFQNSALFDYVAVWENISFNYRKRFNISKKEAKQLAIEKLNDVGLEKNIADMFPIELSGGMKKRVALARAIAHNPEIIMLDEPTSGLDPIMSDIVKETIVKLSKDPSPTIITITHDIHDAFKIADKIAVLYEGSIISHGTVQEI-KNTKNEYIKKFIRYVGTK
4U02 Chain:A ((2-241))
--EPIIRIRNLHKWFGPLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDFQEGEVVVDGLSVKDDRALREIRREVGMVFQQFNLFPHMTVLENVTLAPMRVRRWPREKAEKKALELLERVGI-LDQARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQG-GMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRSFLQRVLH-
General information:
TITO was launched using:
RESULT:
Template:
4U02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142876 for 1913 contacts (-74.7/contact) +
2D Compatibility (PS) -24993 + (NN) -13356 + (LL) 44
1D Compatibility (HY) -16000 + (ID) 4200
Total energy: -201381.0 ( -105.27 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_4U02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U02-query.scw
PDB file :
Tito_Scwrl_4U02.pdb
: