Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDNIIIITGITASGKSELCDNLIKKYGNISIVNCDSKQVYKEIPIITAQPPKQEEF---YRLYGCVPAKENYSVGLWLEDLKGEVDHALENARMPIITGGSGLYISSLINSLSPIPKVSEEIRKNVSELRKNLSKEEFYKLVLSKDSKIQGKISTNDLHRLSRALEVITATGKSIF-VWQESRQLPLFDNFKIYTILPKREDVYRKINSRFVTMIESGAVDEVKKLLN-MNLAPHLPAMRAHGVPEIIKY------LKGKITLSEAIQIAQTNTRHYAKRQYTWFKNQFPNSEVIDCANKLIEFEIF |
| 3EPK Chain:A ((4-289)) | ----VIVIAGTTGVGKSQLSIQLAQKF-NGEVINSDSMQVYKDIPIITNKHPLQEREGIPHHVMNHVDWSEEYYSHRFETECMNAIEDIHRRGKIPIVVGGTHYYLQTLFNKRVDTKSSERKLTRKQLDILESTDPDVIYNTLVKCDPDIATKYHPNDYRRVQRMLEIYYKTGKKPSETFNEQKITLKFDTLFLW-LYSKPEPLFQRLDDRVDDMLERGALQEIKQLYEYYSQNKFTPEQCENGVWQVIGFKEFLPWLT--VKLEDCIERMKTRTRQYAKRQVKWIKKMLIPDIKGDIYLLDATDLSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124142 for 1948 contacts (-63.7/contact) +
2D Compatibility (PS) -28692 + (NN) -16044 + (LL) -76
1D Compatibility (HY) -17600 + (ID) 3950
Total energy: -190504.0 ( -97.79 by residue)
QMean score : 0.516
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