Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIHSDSPRQCLEEIIKSASAKFNESIDIAVNLGIDSRKSEEQVRGTVVLPKGIGKDIKVAVFTQGKHLLEAEKAGANIVGGEDLVQEIKKGKKLDVDWCITTPDFIAKI-TPIAKILGAKGLMPNPKFGTMTSNVAEAIKTIKSGQIKFRTDKNGIIHGKLGNIKFSVDDLLKNLKAFLKVIKSNKPISVKGVYFKSVFLNSTMGKAYKMSKVEDII
4F9T Chain:A ((34-226))
------------------ATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGW-MDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTAMGPSVRINPHS---
General information:
TITO was launched using:
RESULT:
Template:
4F9T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110046 for 1513 contacts (-72.7/contact) +
2D Compatibility (PS) -21259 + (NN) -15493 + (LL) 1632
1D Compatibility (HY) -15200 + (ID) 4000
Total energy: -164366.0 ( -108.64 by residue)
QMean score : 0.572
(partial model without unconserved sides chains):
PDB file :
Tito_4F9T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4F9T-query.scw
PDB file :
Tito_Scwrl_4F9T.pdb
: