Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSWARSSAILMLSTFAAGYQEEVLTLMEKEEEEFLSHEQVKALLEKIRGEVLKTPIWHNVMDPVDDFVGRVMN
2P0M Chain:A ((586-630))
------SSLQMSIVWQLGRDQPIMVPLGQHQEEYFSGPEPRAVLEKFREELAIMDKEIEVRNEKLDIPYEYLR
General information:
TITO was launched using:
RESULT:
Template:
2P0M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -386 for 170 contacts (-2.3/contact) +
2D Compatibility (PS) -4961 + (NN) -2010 + (LL) 552
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -10205.0 ( -60.03 by residue)
QMean score : 0.213
(partial model without unconserved sides chains):
PDB file :
Tito_2P0M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P0M-query.scw
PDB file :
Tito_Scwrl_2P0M.pdb
: