Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKIATWNVNSIRKRVDQ-LCSFIVDDQIDIILLQEIKCTEEQFP------------YVEIEKLGYECIVYGEVARNGVCVLSKH-PILEKFKIDIVEGYQEARYIECLIKHNNQKMRVVSIYVPNGQSLGSHVFEYKLKFLDNLYERMDNLLKNEELIVIAGDYNVAPDEIDVFDPTLLNGQVCFHIKEREKL-KAILNLGFKDAFRMSHPNLQQFSWWRYQGNSLRNNQGMRIDHMLLSPQAVDKLGICYIDDRLRKLENPSDHTPIVSIMEW |
| 4B5H Chain:A ((1-251)) | MLKIISANVNGIRSAYKKGFYEYIAASGTDIVCVQELKAQEADLSADMKNPHGMHGHWHCAEKRGY----------SGVAVYSKRKPDNVQIGMGIEEFDREGRFVRC----DFGRLSVISLYLPSGSSAEERQ-QVKYRFLDAFYPMLEAMKNEGRDIVVCGNWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKA----VSAHVYKDEKFSDHAPLVVEYDY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97905 for 1945 contacts (-50.3/contact) +
2D Compatibility (PS) -25134 + (NN) -11866 + (LL) 1816
1D Compatibility (HY) -15200 + (ID) 3800
Total energy: -152089.0 ( -78.19 by residue)
QMean score : 0.430
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