Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSNLWKKGTDFLGSEFAIMGGAMSWVSERNLVSAISNAGGFGVIACGAMSSDLLEKEIIETQKLTNKPFGVNLITMHPNLSE--------------------------------------LIDVCIETKVSHIVLAGGLPVKPNIEKIKNVGIEVMCFAPSLSLAKRLVKMGVDALIIEGMEAGGHIGPVSTSVLSQEILPYFKDER-------------------VPVFVAGGIGRGEMIVNYLEMGASGCQIGTLFVCTNESIAHKNFKEVFI-KSAARDAISSVQISADFPVIPVRAIANKASDDFMQYQKEIIDKYHKGQISKEDGQLEIEKFWAGALRGAVIEGDIETGSLMAGQSVGMVDKEKPVKEVIDILIQQASNYIESKSVKVGDLIISKASS |
| 4QIS Chain:A ((11-274)) | ---------TRLLGIQQPIIQAPMLGVSTPALAAAVSNAGGLGSIAITGSAAEKGRALIREVRGLTDKPFNVNLFCHRPGQADPARERAWLDYLKPLFAEFGAEPPVRLKNIYLSFLEDPTLLPMLLEERPAAVSFHFGAPPRDQVRALQAVGIRVLVCATTPEEAALVEAAGADAVVAQGIEAGGHRG-------------VFEPERGDAAIGTLALVRLLAARGSLPVVAAGGIMDGRGIRAALELGASAVQMGTAFVLCPESSANAAYREALKGPRAARTALTVTMSGRSARGLPNRMFFDAAAPGVPPLPDYPFVYDATKALQTAALARGNHDFAAQWAGQGAALARELPAAELLRTLVEEL-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179269 for 1686 contacts (-106.3/contact) +
2D Compatibility (PS) -22050 + (NN) -6630 + (LL) 4188
1D Compatibility (HY) -9600 + (ID) 3850
Total energy: -217211.0 ( -128.83 by residue)
QMean score : 0.444
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