Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQDAEAKLKVKLSKRYIPPGNPGGTNFYEDEDFAESYKLYEKRRELLKKKKLQDQTNININKEKLAKKLKEKKIANLDSELSDTEACVINDEEDAMVNQHGINI-ARLKGAIFIDQGPISQREDEQHESERQEGKKATLTREKKVSPINVTIKDTRSKRTCSHDSIVDLNNVSSNGSDSFGSAADAVN |
2XFV Chain:A ((55-85)) | ---------------------------------------------------------------------------------------PTDEERNKLLAHYGIAVNTDDRGELWIELEKCLQLLNMLNLFGLFQDAFEFEEP----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6478 for 119 contacts (-54.4/contact) +
2D Compatibility (PS) -3351 + (NN) -1833 + (LL) 8288
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -5224.0 ( -43.90 by residue)
QMean score : 0.312
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